Pixel clustering algorithm tailored to multi-contrast Jones matrix based optical coherence tomography (MC-JMT) is demonstrated. This algorithm clusters multiple pixels of MC-JMT in a five-dimensional (5-D) feature space which comprises dimensions of lateral space, axial space, logarithmic scattering OCT intensity, squared power of Doppler shift and degree of polarization uniformity. This 5-D clustering provides clusters of pixels, so called as superpixels. The superpixels are utilized as local regions for pixels averaging. The averaging decreases the noise in the measurement as preserving structural details of the sample. A simple decision-tree algorithm is applied to classified superpixels into some tissue types. This ...

An advanced version of Jones matrix optical coherence tomography (JMT) is demonstrated for Doppler and polarization sensitive imaging of the posterior eye. JMT is capable of providing localized flow tomography by Doppler detection and investigating the birefringence property of tissue through a three-dimensional (3-D) Jones matrix measurement. Owing to an incident polarization multiplexing scheme based on passive optical components, this system is stable, safe in a clinical environment, and cost effective. Since the properties of this version of JMT provide intrinsic compensation for system imperfection, the system is easy to calibrate. Compared with the previous version of JMT, this advanced ...

We have grown monolithic multi-color InAs quantum dots (QDs) for use as a near-infrared (NIR) broadband light source. Our previously developed rotational metal mask enables selective-area growth of QD ensembles with emission peak wavelengths controlled by strain-reducing layers thicknesses, varying the emission approximately 1.2–1.3  μ m. The peak shift value was up to 120 nm, and a combined 160-nm-bandwidth emission spectrum was achieved. Further, the emission spectra shapes were controlled using specific optical excitation powers for each QD ensemble. These results demonstrate the effectiveness of multi-color QDs as a spectrum-shape-controllable NIR broadband light source, particularly suited for optical ...

An automated choroidal vessel segmentation and quantification method for high-penetration optical coherence tomography (OCT) was developed for advanced visualization and evaluation of the choroidal vasculature. This method uses scattering OCT volumes for the segmentation of choroidal vessels by using a multi-scale adaptive threshold. The segmented choroidal vessels are then processed by multi-scale morphological analysis to quantify the vessel diameters. The three-dimensional structure and the diameter distribution of the choroidal vasculature were then obtained. The usefulness of the method was then evaluated by analyzing the OCT volumes of normal subjects.

Collagen crosslinking (CXL) has shown promising results in the prevention of the progression of keratoconus and corneal ectasia. However, techniques for in vivo and in situ assessment of the treatment are limited. In this study, ex vivo porcine eyes were treated with a chemical CXL agent (glutaraldehyde), during which polarization sensitive optical coherence tomography (PS-OCT) recordings were acquired simultaneously to assess the sensitivity of the technique to assess changes in the cornea. The results obtained in this study suggest that PSOCT may be a suitable technique to measure CXL changes in situ and to assess the local changes in the ...

Retinal and choroidal vascular imaging is a key to the better understanding and diagnosis of eye diseases. To achieve comprehensive three-dimensional capillary imaging, we used an enhanced vascular imaging technique, so called adaptive optics optical coherence angiography (AO-OCA). AO-OCA enables in vivo high-resolution and high-contrast micro-vascular imaging by detecting Doppler frequency shifts. Using this technique, the retinal and choroidal vasculatures of healthy subjects were imaged. The results show that both intensity and Doppler power images have sufficient contrast to discriminate almost all vasculatures from the static tissue. However, the choriocapillaris, pre-arterioles, and post-venules in the Sattler layer were more contrasted ...