1. Articles from Mariam Bapir

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    1. OCTAVA: An open-source toolbox for quantitative analysis of optical coherence tomography angiography images

      OCTAVA: An open-source toolbox for quantitative analysis of optical coherence tomography angiography images

      Optical coherence tomography angiography (OCTA) performs non-invasive visualization and characterization of microvasculature in research and clinical applications mainly in ophthalmology and dermatology. A wide variety of instruments, imaging protocols, processing methods and metrics have been used to describe the microvasculature, such that comparing different study outcomes is currently not feasible. With the goal of contributing to standardization of OCTA data analysis, we report a user-friendly, open-source toolbox, OCTAVA (OCTA Vascular Analyzer), to automate the pre-processing, segmentation, and quantitative analysis of en face OCTA maximum intensity projection images in a standardized workflow. We present each analysis step, including optimization of filtering ...

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    1. (1 articles) University of Western Australia
    2. (1 articles) Columbia University
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